Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
THYM rs73818933 chr4:12577892 G/A 1.01E-6 118 38.23 57.27 12.78 KM Plot
THYM rs73818943 chr4:12583894 G/A 1.35E-6 119 38.23 53.27 12.78 KM Plot
THYM rs7398 chr7:76135134 G/A 2.94E-5 117 39.5 46.23 28.43 KM Plot
THYM rs74005245 chr15:28080500 C/A 8.44E-9 119 38.83 54.83 12.63 KM Plot
THYM rs74008961 chr15:42339699 G/A 0.000141 118 41.77 46.15 28.43 KM Plot
THYM rs74029394 chr15:93974264 C/T 3.31E-13 118 38.9 50.07 6 KM Plot
THYM rs7403417 chr15:68707423 G/A 1.36E-8 116 12.63 38.33 42.25 KM Plot
THYM rs74172660 chr19:4798021 C/T 3.17E-6 117 41.77 38.33 25.83 KM Plot
THYM rs74193959 chr4:70065226 G/A 5.73E-13 118 39.75 49.6 6 KM Plot
THYM rs74277390 chr18:33619822 C/CAT 0.000136 119 49.4 35 51.23 KM Plot
THYM rs74286195 chr4:115604229 T/C 0 118 38.33 44.58 4.13 KM Plot
THYM rs74286196 chr4:115610746 T/C 0 118 38.33 44.58 4.13 KM Plot
THYM rs74337886 chr4:70087847 C/T 4.7E-13 119 41.77 35 6 KM Plot
THYM rs74362816 chr8:19203233 G/A 0.000105 118 38.83 45.87 12.77 KM Plot
THYM rs74427282 chr4:70061577 C/T 5.73E-13 118 39.75 49.6 6 KM Plot